Pathogens Portal

The Pathogens Portal, launched in July 2023, is an invaluable resource for researchers, clinicians, and policymakers who need access to the latest and most comprehensive datasets on pathogens. The portal is a collaborative effort between the European Molecular Biology Laboratory’s European Bioinformatics Institute (EMBL-EBI) and partners. The Pathogens Portal is based on the European COVID-19 Data Portal. A manuscript describing the European COVID-19 Data Portal was published in 2021: https://europepmc.org/article/MED/34048576 .

Local Pathogens Portals

Local Pathogens Portals are locally-deployed resources that:

  • Provide a one-stop portal for local pathogen data and projects.
  • Foster collaborations and synergies by creating a forum for discussion.
  • Provide documentation and training material on FAIR research data management, especially for pathogen omics data.
  • Showcase local resources that contribute to pathogen data sharing, access, analysis, and interpretation.
  • Offer content also in the local language(s).

Pathogen Data Platform Capacity Framework

Starting from work done within the ELIXIR-CONVERGE and BY-COVID projects, we will develop a Capacity Framework for Pathogen Data Platforms.

Events

october

02oct3:00 PM4:30 PMVirtual EventInfluenza bioinformatics: IRMA pipeline webinarIRMA pipeline webinar with Samuel Shepard, IRMA developer

Latest posts

Minutes – 20 Sept 2024 – PDN All-Hands Meeting (kick-off)

Forty-two PDN members, representing all 12 institutions, were present at the kick-off meeting on 20th September 2024.

PDN kick-off meeting

The PDN kick-off meeting will take place virtually on 20th September 2024. Tentative agenda below. Minutes will be posted after the event. Comments and ideas before the meeting are welcome, thank you. Welcome & Intro of new membersLegal aspects of BRC projects,...

PDN awarded NIH NIAID BRC program funding

The Pathogen Data Network just received the Notice of Award from the NIH NIAID Bioinformatics Resource Centers (BRC) for Infectious Diseases Programs. The project is planned over 4 years. We are very grateful to NIH for their support, and to all the consortium members...

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